- Find enumber that failed and change in seqbank
- Fix Chip seq label on ATAC plots
- Add percentages of PCAs
Find DEGs relative to control
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make heatmap of DEGs
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K-means clustering
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Find all DEGs within celltype
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Find all DEGs within protein
Pairwise RELI for ChIP-seq and ATAC
- After finding differential peaks
- overlap and enrichment heatmaps
Findings
- Cluster by cell type
- UMAPs didn't show separation except for cell type