• [X] Regenerate Experiment (part B)
• [X] Check GSE that are doubles
• [X] EGA (hollow circles [black outline]

Figure 5 [2/2]

• [X] Send Matt SNPmoods output
• [X] Check methods for how the GM12878 annotation is added

Figure 6

• Section in methods, add "Positive" and "Negative" cutoffs