T cell is expressed early in T cell development

• There is an X over T cells currently
• In the legend, we should point out that PU.1 is expressed in T cell development, but not in adults

DONE UMAP

• Note taken on [2025-06-02 Mon 19:18]
  moved to the agenda
• Set colors to match cell types figure

Add Bullets that tell you what you learn

• Bullet summaries for each figure

GREAT ANALYSIS

• Start with Biological process (GREAT)
• 7 or 8 (eosinophil) (lump together)
• GO slim (removes redundant pathways)
• Lee has the code

DONE Figure 3

• Note taken on [2025-06-02 Mon 19:17]
  Moved to the agenda

Reorder columns by ets, spi1, content

DONE MARIO, Phenotype RELI

• Note taken on [2025-06-02 Mon 19:18]
  moved to agenda
• Connect to GWAS (Leah sent out new catalogue)
• write resuable tool for this plot

Phenotype RELI

A clustered heatmap (rows are diseases, columns are cell types)

Harley et al. 2018 Last figure?

• New disease RELI
• Over half of "diseases" are measurements (blood pressure) that are not necessary
• Don't inlcude social variables
• Run RELI before making figures