What does this mean?
A statement on whether measurements were taken from distinct samples or whether the same sample was measured repeatedly
Good enough?
Estimates of effect sizes (e.g. Cohen's d, Pearson's r), indicating how they were calculated.
The allelic PU.1 binding predictions produced by each method were then evaluated by comparing to MARIO allelic scores using the Spearman correlation.
Software
Info I need
ChIP-seq seqction
- Peak calling parameters (occurred upward in the pipeline chain)
- Sequencing depth
- Data quality (don't know what this is supposed to be)
- Software (is this just macs2?)