Matt meeting<2025-12-15 Mon>

Matt meeting

DONE Guidelines for supplementary files

  • Note taken on [2025-12-15 Mon 11:06]
    Drop any columns that are not used in the analysis or are included in Ellie's paper.
  • Should I toss all columns not directly used in analysis?
  • Does he want to review them before I drop columns

DONE Check status of PBM motif/scores

  • Still need to run SNPs-moods
    • Matt will give the SNPs-moods shpeal

DONE SNPs-moods methods

  • Is there a paper I can cite for the SNPs-moods tool, or just cite MOODS?

TODO HPV metadata

  • Andrew has huge dataset, act1:whole virus infection act2: head neck cancer HPV condition. Determine effect of virus molecules using RELI.
  • HPV ChIP-seq data